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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CTSF, cathepsin F
Sequence ID:NM_003793
RefSeqGene ID:NG_032973
Entrez Gene ID:8722
Ensembl ID:ENSG00000174080

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 66330938 - 66335099

 Exon Info From UCSC:
NM_003793

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3535532Full LengthBC011682cathepsin F
4830274Full LengthBC036451cathepsin F

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003784  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_003793 NP_003784 Q9UBX1 EC 3.4.22.41 Peptidase_C1
Inhibitor_I29

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF071748 AAC78838 Q9UBX1 EC 3.4.22.41
AF071749 AAC78839 Q9UBX1 EC 3.4.22.41
AF088886 AAD26616 Q9UBX1 EC 3.4.22.41
AF136279 AAF13146 Q9UBX1 EC 3.4.22.41
BC011682 AAH11682 Q9UBX1 EC 3.4.22.41
BC036451 AAH36451 Q9UBX1 EC 3.4.22.41
DQ893245 ABM84171    
AK313657 BAG36411 Q9UBX1 EC 3.4.22.41
AJ007331 CAB42883 Q9UBX1 EC 3.4.22.41
AL137742 CAB70900 Q9UBX1 EC 3.4.22.41
CR541680 CAG46481 Q6FHS1  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTSF NP_003784 M.musculus Ctsf 56464 Gene Info NP_063914 78
R.norvegicus Ctsf 361704   NP_001029282 77
C.elegans tag-196 179240   NP_505215 50
A.thaliana AT3G54940 824659   NP_567010 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)