Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SF3A2, splicing factor 3a, subunit 2, 66kDa
Sequence ID:NM_007165
Entrez Gene ID:8175
Ensembl ID:ENSG00000104897

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 2236822 - 2248545

NM_007165 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18522368152236899
8624822433802243542
24932022445422244613
32136722447312244777
36847722454442245553
47852722467512246800
52866822468802247020
66973722475922247660
738164922477652248676

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820900Full LengthBC004434splicing factor 3a, subunit 2, 66kDa
2959124Full LengthBC009903splicing factor 3a, subunit 2, 66kDa
3906524IncompleteBC015804splicing factor 3a, subunit 2, 66kDa

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007165 NP_009096 Q15428  

Related Sequences

 
mRNAGenPeptSwissProt
BC004434 AAH04434 Q15428
BC009903 AAH09903 Q15428
BC015804 AAH15804 Q05DF2
DQ896781 ABM87780  
AK314815 BAG37338 Q15428

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SF3A2 NP_009096 R.norvegicus Sf3a2 299620   NP_001011986 97
M.musculus Sf3a2 20222 Gene Info NP_038679 95
D.melanogaster CG10754 39456   NP_648603 80
A.gambiae AgaP_AGAP011035 1269464   XP_308101 79
C.elegans F11A10.2 178147   NP_502290 79
A.thaliana AT2G32600 817820   NP_565747 64
S.pombe sap62 2540622   NP_596585 63
N.crassa NCU07299 3878302   XP_962153 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)