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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. APOL1, apolipoprotein L, 1
Sequence ID:NM_001136540
NM_001136541
NM_003661
NM_145343
NM_145344
RefSeqGene ID:NG_023228
Entrez Gene ID:8542
Ensembl ID:ENSG00000100342

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
END-STAGE RENAL DISEASE, NONDIABETIC 
SCHIZOAFFECTIVEDISORDERAKT1
APOL2
APOL4
CHI3L1
CHI3L1
COMT
DAO
DAOA
DISC1
DISC2
DRD3
DTNBP1
HTR2A
LGR4
MTHFR
MTHFR
RTN4R
SYN2

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 36649125 - 36663567

 Exon Info From UCSC:
NM_001136540
NM_001136541
NM_003661
NM_145343

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4512933Full LengthBC112943apolipoprotein L, 1
40034503Full LengthBC127186apolipoprotein L, 1
40034505Full LengthBC143038apolipoprotein L, 1
40034506Full LengthBC143039apolipoprotein L, 1
40148156Full LengthBC141823apolipoprotein L, 1
4661222IncompleteBC017331apolipoprotein L, 1
40034501IncompleteBC114475apolipoprotein L, 1
40034502IncompleteBC113867apolipoprotein L, 1
40148866IncompleteBC142720apolipoprotein L, 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003652  NP_663318  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001136540 NP_001130012    
NM_001136541 NP_001130013    
NM_003661 NP_003652 O14791 ApoL
NM_145343 NP_663318   ApoL

Related Sequences

 
mRNAGenPeptSwissProt
AF019225 AAB81218 O14791
AF323540 AAG53690 O14791
BC112943 AAI12944 Q2KHQ6
BC113867 AAI13868 Q29RW7
BC114475 AAI14476 Q1WWL5
BC127186 AAI27187 Q2KHQ6
BC141823 AAI41824 Q2KHQ6
BC142720 AAI42721 A5PL32
BC143038 AAI43039 Q2KHQ6
BC143039 AAI43040 O14791
AF305224 AAK20210 O14791
AF305428 AAL09358 O14791
AK313752 BAG36492 B2R9E5
AK296099 BAG58852 B1AH95
AK298053 BAG60347 B4DNT5
AK300454 BAG62174 B4DU12
AK303919 BAG64847 B4E1N5

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)