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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SNAPC4, Small nuclear RNA activating complex, polypeptide 4, 190kDa
Sequence ID:NM_003086
Entrez Gene ID:6621
Ensembl ID:ENSG00000165684

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 139270028 - 139293249

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069127Full LengthBC172433small nuclear RNA activating complex, polypeptide 4, 190kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003077  

Protein Infomation

NM_003086 NP_003077 Q5SXM2 Myb_DNA-binding

Related Sequences

AF032387 AAC02972 Q5SXM2
BC172433 AAI72433  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SNAPC4 NP_003077 M.musculus Snapc4 227644 Gene Info NP_758842 65
R.norvegicus Snapc4 362088   NP_001102044 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)