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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PAX7, paired box 7
Sequence ID:NM_001135254
NM_002584
NM_013945
RefSeqGene ID:NG_023262
Entrez Gene ID:5081
Ensembl ID:ENSG00000009709

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
RHABDOMYOSARCOMA 2, ALVEOLARFOXO1
PAX3

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 19072975 - 19075359

 Exon Info From UCSC:
NM_001135254
NM_002584
NM_013945

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40121582Full LengthBC121165paired box 7
40121584Full LengthBC121166paired box 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002575  NP_039236  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135254 NP_001128726    
NM_002584 NP_002575 P23759 Homeobox
PAX
NM_013945 NP_039236   Homeobox
PAX

Related Sequences

 
mRNAGenPeptSwissProt
BC121165 AAI21166 P23759
BC121166 AAI21167 P23759
DQ322591 ABC48797 Q2PJS5
X96743 CAA65520 P23759
Z35141 CAA84513 P23759

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PAX7 NP_001128726 M.musculus Pax7 18509 Gene Info NP_035169 98
R.norvegicus Pax7 500574   XP_575941 97
A.gambiae AgaP_AGAP010358 1272681   XP_559100 73
D.melanogaster gsb-n 38004   NP_523862 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)