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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ITGA9, integrin, alpha 9
Sequence ID:NM_002207
RefSeqGene ID:NG_016166
Entrez Gene ID:3680
Ensembl ID:ENSG00000144668

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 37862525 - 37865002

 Exon Info From UCSC:
NM_002207

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5199296Full LengthBC030198integrin, alpha 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002198  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002207 NP_002198 Q13797 Integrin_alpha
FG-GAP
Integrin_alpha2

Related Sequences

 
mRNAGenPeptSwissProt
L24158 AAA16099 Q13797
BC030198 AAH30198 Q8N6H6
D25303 BAA04984 Q13797

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ITGA9 NP_002198 M.musculus Itga9 104099 Gene Info NP_598482 90
R.norvegicus Itga9 685004   XP_001061864 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)