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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. S100A9, S100 calcium binding protein A9
Sequence ID:NM_002965
Entrez Gene ID:6280
Ensembl ID:ENSG00000163220

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 153330348 - 153333503

NM_002965 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
128153330329153330356
29193153330744153330908
194576153333119153333501

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6060124Full LengthBC047681S100 calcium binding protein A9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002956  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002965 NP_002956 P06702 efhand
S_100

Related Sequences

 
mRNAGenPeptSwissProt
M26311 AAA68480 P06702
BC047681 AAH47681 P06702
AK311882 BAG34823 B2R4M6
X06233 CAA29579 P06702
CR542207 CAG47003 P06702
CR542224 CAG47020 P06702

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens S100A9 NP_002956 R.norvegicus S100a9 94195   NP_446039 65
M.musculus S100a9 20202 Gene Info NP_033140 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)