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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CPT1C, carnitine palmitoyltransferase 1C
Sequence ID:NM_001136052
NM_001199752
NM_001199753
NM_152359
Entrez Gene ID:126129
Ensembl ID:ENSG00000169169

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 50194406 - 50216988

 Exon Info From UCSC:
NM_001136052
NM_152359

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3872727Full LengthBC029104carnitine palmitoyltransferase 1C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689572  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001136052 NP_001129524      
NM_001199752 NP_001186681      
NM_001199753 NP_001186682      
NM_152359 NP_689572 Q8TCG5 EC 2.3.1.21 Carn_acyltransf

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC029104 AAH29104 Q8TCG5 EC 2.3.1.21
AF357970 AAL99615 Q8TCG5 EC 2.3.1.21
DQ891552 ABM82478    
DQ894739 ABM85665    
AK074389 BAB85068 Q8TCG5 EC 2.3.1.21
AB208884 BAD92121 Q59H75  
AK289713 BAF82402 A8K0Z8  
AK290092 BAF82781 Q8TCG5 EC 2.3.1.21
AK096516 BAG53311 B3KU49  
AK299866 BAG61720 B4DSQ8  
AL831876 CAD38561 Q8TCG5 EC 2.3.1.21

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CPT1C NP_689572 M.musculus Cpt1c 78070 Gene Info NP_710146 84
R.norvegicus Cpt1c 308579   NP_001030097 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)