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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PMS1, PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
Sequence ID:NM_000534
NM_001128143
NM_001128144
RefSeqGene ID:NG_008648
Entrez Gene ID:5378
Ensembl ID:ENSG00000064933

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 190656535 - 190738254

 Exon Info From UCSC:
NM_000534
NM_001128143
NM_001128144

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40008290Full LengthBC096331PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
4822417IncompleteBC036376PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
40008289IncompleteBC096330PMS1 postmeiotic segregation increased 1 (S. cerevisiae)
40008291IncompleteBC096332PMS1 postmeiotic segregation increased 1 (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000525  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000534 NP_000525 P54277 HMG_box
DNA_mis_repair
HATPase_c
NM_001128143 NP_001121615    
NM_001128144 NP_001121616    

Related Sequences

 
mRNAGenPeptSwissProt
BC084548 AAH84548 Q5XG96
BC096330 AAH96330 P54277
BC096331 AAH96331 I6L9H5
BC096332 AAH96332 P54277
BT006947 AAP35593 Q7KZT4
AY540750 ABB04019 Q3BDU4
AY540751 ABB04020 Q3BDU3
AB102869 BAD89398 Q5FBZ9
AB102870 BAD89399 P54277
AB102871 BAD89400 Q5FBZ7
AB102872 BAD89401 Q5FBZ6
AB102873 BAD89402 Q5FBZ5
AB102874 BAD89403 Q5FBZ4
AB102875 BAD89404 P54277
AB102876 BAD89405 Q5FBZ2
AB102877 BAD89406 Q5FBZ1
AK295602 BAG58489 B4DIH7
AK297440 BAG59866 B4DMF4
AK304634 BAG65413 B4E3A1
AK316215 BAH14586 B7ZAA0
CR749432 CAH18270 Q68DF0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PMS1 NP_000525 M.musculus Pms1 227099 Gene Info NP_705784 76
R.norvegicus Pms1 494322   NP_001009535 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)