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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ITM2C, integral membrane protein 2C
Sequence ID:NM_001012514
NM_001012516
NM_030926
Entrez Gene ID:81618
Ensembl ID:ENSG00000135916

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q37Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 231729740 - 231742814

 Exon Info From UCSC:
NM_001012514
NM_001012516
NM_030926

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3162430Full LengthBC002424integral membrane protein 2C
5224043Full LengthBC025742integral membrane protein 2C
5759920Full LengthBC050668integral membrane protein 2C
30558635Full LengthBC098563integral membrane protein 2C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001012532  NP_112188  NP_001012534  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012514 NP_001012532   BRICHOS
NM_001012516 NP_001012534   BRICHOS
NM_030926 NP_112188 Q9NQX7 BRICHOS

Related Sequences

 
mRNAGenPeptSwissProt
AF272043 AAF89492 Q9NQX7
AF271781 AAG44792 Q9NQX7
BC002424 AAH02424 Q9NQX7
BC025742 AAH25742 Q9NQX7
BC050668 AAH50668 Q9NQX7
BC098563 AAH98563 Q9NQX7
AY049777 AAL15434 Q9NQX7
EU831696 ACE86530  
EU832568 ACE86970  
EU831609 ACE87209  
EU831632 ACE87232  
EU832488 ACE87660  
HQ448579 ADQ33057  
D87062 BAB46918 Q96JS4
AB003629 BAB46927 Q9NQX7
AK090975 BAC03562 Q9NQX7
AK075361 BAC11570 Q9NQX7
AK222697 BAD96417 Q9NQX7
AK056321 BAG51676 Q9NQX7
AK295503 BAG58423 B4DIB1
AK303199 BAG64290 B4E028
AL136603 CAB66538 Q9NQX7
AL713651 CAD28460 Q9NQX7
CR457208 CAG33489 Q9NQX7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ITM2C NP_112188 M.musculus Itm2c 64294 Gene Info NP_071862 94
R.norvegicus Itm2c 301575   NP_001009674 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)