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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ALOX15B, arachidonate 15-lipoxygenase, type B
Sequence ID:NM_001039130
NM_001039131
NM_001141
RefSeqGene ID:NG_029482
Entrez Gene ID:247
Ensembl ID:ENSG00000179593

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 7942473 - 7951883

 Exon Info From UCSC:
NM_001039130
NM_001039131
NM_001141

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4778890Full LengthBC035217arachidonate 15-lipoxygenase, type B
4804186Full LengthBC063647arachidonate 15-lipoxygenase, type B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001132  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001039130 NP_001034219      
NM_001039131 NP_001034220      
NM_001141 NP_001132 O15296 EC 1.13.11.33 Lipoxygenase
PLAT

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U78294 AAB61706 O15296 EC 1.13.11.33
BC035217 AAH35217 O15296 EC 1.13.11.33
BC063647 AAH63647 O15296 EC 1.13.11.33
AF468051 AAL76274 O15296 EC 1.13.11.33
AF468052 AAL76275 O15296 EC 1.13.11.33
AF468053 AAL76276 O15296 EC 1.13.11.33
AF468054 AAL76277 O15296 EC 1.13.11.33
DQ891345 ABM82271    
EU176579 ABW03380    
AK292779 BAF85468 A8K9R4  
AK298095 BAG60380 B4DNW8  
AK300554 BAG62260 B4DU98  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ALOX15B NP_001132 R.norvegicus Alox15b 266604   NP_695213 81
M.musculus Alox8 11688 Gene Info NP_033791 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)