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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TUBB4A, tubulin, beta 4A class IVa
Sequence ID:NM_006087
Entrez Gene ID:10382
Ensembl ID:ENSG00000104833

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 6494329 - 6502321

NM_006087 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
32193464943296496231
1935204565012976501407
2046215465015256501633
2155231865021666502329

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3603726Full LengthBC006570tubulin, beta 4
4155617Full LengthBC013683tubulin, beta 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006078  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006087 NP_006078   Tubulin
Tubulin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC006570 AAH06570 P04350
BC013683 AAH13683 P04350
EU831895 ACE86654  
EU831818 ACE87336  
AK075307 BAG52106 P04350
AK293503 BAG56988 B4DE77
AK295917 BAG58705 B4DJ43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TUBB4A NP_006078 M.musculus Tubb4a 22153 Gene Info NP_033477 100
A.thaliana TUB4 834459   NP_199247 85
A.thaliana TUB9 827837   NP_193821 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)