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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PPIC, peptidylprolyl isomerase C (cyclophilin C)
Sequence ID:NM_000943
Entrez Gene ID:5480
Ensembl ID:ENSG00000168938

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 122358944 - 122372383

NM_000943 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
8626122359079122359697
627811122361478122361662
812905122364469122364562
9061019122364999122365112
10201241122372203122372424

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3610178Full LengthBC002678peptidylprolyl isomerase C (cyclophilin C)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000934  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000943 NP_000934 P45877 EC 5.2.1.8 Pro_isomerase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
S71018 AAB31350 P45877 EC 5.2.1.8
BC002678 AAH02678 P45877 EC 5.2.1.8
HQ447899 ADQ32383    
AK290321 BAF83010 A8K2Q6  
AK304053 BAG64962 B4E200  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPIC NP_000934 M.musculus Ppic 19038 Gene Info NP_032934 91
R.norvegicus Ppic 291463   NP_001004215 87
A.thaliana AT3G55920 824758   NP_567029 62
S.cerevisiae CPR2 856454   NP_011924 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)