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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C1QTNF2, C1q and tumor necrosis factor related protein 2
Sequence ID:NM_031908
Entrez Gene ID:114898
Ensembl ID:ENSG00000145861

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q33.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 159776003 - 159797642

NM_031908 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
272028159774786159776787
20292281159781774159782026
22822411159797518159797647

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3530165IncompleteBC011699C1q and tumor necrosis factor related protein 2
5179095IncompleteBC054506C1q and tumor necrosis factor related protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114114  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031908 NP_114114 Q9BXJ5 C1q
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
BC011699 AAH11699 Q9BXJ5
BC054506 AAH54506 Q9BXJ5
AF329836 AAK17960 Q9BXJ5
AY358839 AAQ89198 Q9BXJ5
DQ893261 ABM84187  
DQ896590 ABM87589  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C1QTNF2 NP_114114 R.norvegicus C1qtnf2 497886   XP_573071 94
M.musculus C1qtnf2 69183 Gene Info NP_081255 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)