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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GIF, gastric intrinsic factor (vitamin B synthesis)
Sequence ID:NM_005142
RefSeqGene ID:NG_008120
Entrez Gene ID:2694
Ensembl ID:ENSG00000134812

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
INTRINSIC FACTOR DEFICIENCY 

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 59609939 - 59612972

NM_005142 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
262965959674759597017
2974155959915059599268
4166175960328059603481
6187955960464659604823
7969775960861559608796
97811185960991559610055
111912325961050059610613
123314095961135159611527
141015365961284759612973

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5759934Full LengthBC037958gastric intrinsic factor (vitamin B synthesis)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005133  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005142 NP_005133 P27352 Cobalamin_bind

Related Sequences

 
mRNAGenPeptSwissProt
BC037958 AAH37958 P27352
DQ892469 ABM83395  
DQ895682 ABM86608  
AK314275 BAG36935 P27352
AK301290 BAG62848 B4DVY6
AK301295 BAG62853 P27352
X76562 CAA54061 P27352

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GIF NP_005133 M.musculus Gif 14603 Gene Info NP_032144 82
R.norvegicus Gif 29319   NP_058858 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)