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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATP10B, ATPase, class V, type 10B
Sequence ID:NM_025153
Entrez Gene ID:23120
Ensembl ID:ENSG00000118322

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 159990139 - 160279046

 Exon Info From UCSC:
NM_025153

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068205Full LengthBC167815ATPase, class V, type 10B
3048848IncompleteBC108322ATPase, class V, type 10B
4869192IncompleteBC018773ATPase, Class V, type 10B

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_025153 NP_079429 O94823 EC 3.6.3.1  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC108322 AAI08323 Q2YDW8  
BC167815 AAI67815 O94823 EC 3.6.3.1
AB018258 BAA34435 O94823 EC 3.6.3.1
AK025130 BAB15074 O94823 EC 3.6.3.1
AK090832 BAC03528 O94823 EC 3.6.3.1
AK295081 BAG58123 B4DHG1  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP10B NP_079429 M.musculus Atp10b 319767 Gene Info NP_795973 84
R.norvegicus Atp10b 303056   XP_220314 84
A.thaliana ALA1 830375   NP_568146 43
S.pombe SPAC4F10.16c 2543523   NP_594759 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)