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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. VCAM1, vascular cell adhesion molecule 1
Sequence ID:NM_001078
NM_001199834
NM_080682
RefSeqGene ID:NG_023034
Entrez Gene ID:7412
Ensembl ID:ENSG00000162692

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p32-p31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 101185297 - 101204598

 Exon Info From UCSC:
NM_001078
NM_080682

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4845424Full LengthBC017276vascular cell adhesion molecule 1
6375943Full LengthBC085003vascular cell adhesion molecule 1
30339170Full LengthBC068490vascular cell adhesion molecule 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001069  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001078 NP_001069 P19320 ig
C2-set
I-set
V-set
NM_001199834 NP_001186763    
NM_080682 NP_542413    

Related Sequences

 
mRNAGenPeptSwissProt
M30257 AAA51917 P19320
M60335 AAA61269 P19320
BC017276 AAH17276 P19320
BC068490 AAH68490 P19320
BC085003 AAH85003 P19320
EU832082 ACE86744  
EU831989 ACE87430  
AK223266 BAD96986 Q53FL7
AK291732 BAF84421 P19320
AK296692 BAG59286 B4DKS4
X53051 CAA37218 P19320
CR749464 CAH18296 Q68DC4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VCAM1 NP_001069 R.norvegicus Vcam1 25361   NP_037021 77
M.musculus Vcam1 22329 Gene Info NP_035823 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta