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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPS27L, Ribosomal protein S27-like
Sequence ID:NM_015920
Entrez Gene ID:51065
Ensembl ID:ENSG00000185088

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 63446051 - 63449663

NM_015920 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
27216344553963446258
7228326344781963447929
8339416344861163448719
94210846344959863449740

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3827362Full LengthBC003667ribosomal protein S27-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057004  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015920 NP_057004 Q71UM5 Ribosomal_S27e

Related Sequences

 
mRNAGenPeptSwissProt
AF070668 AAD20974 Q71UM5
BC003667 AAH03667 Q71UM5
HQ448713 ADQ33191  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPS27L NP_057004 M.musculus Rps27l 67941 Gene Info NP_080743 100
R.norvegicus LOC100362405 100362405   XP_002728008 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)