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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLASP2, cytoplasmic linker associated protein 2
Sequence ID:NM_001207044
NM_015097
Entrez Gene ID:23122
Ensembl ID:ENSG00000163539

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 33538484 - 33700572


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021646Full LengthBC140778cytoplasmic linker associated protein 2
3874558IncompleteBC011530cytoplasmic linker associated protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055912  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001207044 NP_001193973    
NM_015097 NP_055912   HEAT

Related Sequences

 
mRNAGenPeptSwissProt
BC011530 AAH11530 Q96F87
BC029035 AAH29035 O75122
BC140778 AAI40779 B2RTR1
DQ200868 ABB13628 Q07A20
DQ200869 ABB13629 Q07A19
AB014527 BAA31602 O75122
AK024770 BAB14995 O75122
AK091451 BAC03667 Q8NB74
AK090716 BAG52218 B3KR06
AK293963 BAG57335 B4DF74
AK294345 BAG57614 B4DG03
AK297322 BAG59785 B4DM73
AL137636 CAB70852 O75122
AJ288059 CAC35158 O75122
BX640725 CAE45842 Q6N029

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLASP2 NP_055912 R.norvegicus Clasp2 114514   NP_446174 97
M.musculus Clasp2 76499 Gene Info NP_001107819 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)