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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAN, RAN, member RAS oncogene family
Sequence ID:NM_006325
Entrez Gene ID:5901
Ensembl ID:ENSG00000132341

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 131357616 - 131360826

NM_006325 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
155131356616131356670
56101131357128131357173
102186131357380131357464
187312131357547131357672
313500131359090131359277
501671131360156131360326
6721069131360426131360823

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3615048Full LengthBC004272RAN, member RAS oncogene family
3830061Full LengthBC014518RAN, member RAS oncogene family
3910005Full LengthBC014901RAN, member RAS oncogene family
4342591Full LengthBC016654RAN, member RAS oncogene family
5504629Full LengthBC051908RAN, member RAS oncogene family
6644326Full LengthBC072000RAN, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006316  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006325 NP_006316 P62826 Ras

Related Sequences

 
mRNAGenPeptSwissProt
M31469 AAA36546 P62826
AF052578 AAC05840 P62826
AF054183 AAC99400 P62826
BC004272 AAH04272 P62826
BC014518 AAH14518 P62826
BC014901 AAH14901 P62826
BC016654 AAH16654 P62826
BC051908 AAH51908 P62826
BC072000 AAH72000 P62826
AF501887 AAM15923 P62826
BT007271 AAP35935 P62826
DQ892358 ABM83284  
DQ895565 ABM86491  
AB062399 BAB93486 P62826
AK312466 BAG35373 A8K3Z8
AK300934 BAG62563 B4DV51
AK316193 BAH14564 B4DV51
CR450347 CAG29343 P62826

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAN NP_006316 M.musculus Ran 19384 Gene Info NP_033417 100
R.norvegicus Ran 84509   NP_445891 100
A.gambiae AgaP_AGAP007699 1269534   XP_001687857 91
C.elegans ran-1 176503   NP_499369 90
D.melanogaster ran 44072   NP_651969 87
S.cerevisiae GSP1 851000   NP_013396 83
S.cerevisiae GSP2 854357   NP_014828 82
S.pombe spi1 2540149   NP_596827 82
N.crassa NCU09269 3880853   XP_964704 80
P.falciparum Ran 810730   XP_001347854 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta