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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UBE2L3, ubiquitin-conjugating enzyme E2L 3
Sequence ID:NM_001256355
NM_001256356
NM_003347
NR_028436
NR_046082
NM_198157
Entrez Gene ID:7332
Ensembl ID:ENSG00000185651

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 21922018 - 21978323

Transcript StartTranscript EndChromosomal Start Chromosomal End
11042192195621922059
1052002194714921947244
2013872196514521965331
38829072197580321978322

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4214359Full LengthBC053368ubiquitin-conjugating enzyme E2L 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003338  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001256355 NP_001243284      
NM_001256356 NP_001243285      
NM_003347 NP_003338 P68036 EC 6.3.2.19 UQ_con

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
S81003 AAB36017 P68036 EC 6.3.2.19
BC053368 AAH53368 P68036 EC 6.3.2.19
AK291083 BAF83772 A8K4W8  
AK311761 BAG34704 P68036 EC 6.3.2.19
AK293179 BAG56722 B4DDG1  
AK299985 BAG61806 B4DSZ4  
AJ000519 CAA04156 P68036 EC 6.3.2.19
X92962 CAA63538 P68036 EC 6.3.2.19
CR456606 CAG30492 P68036 EC 6.3.2.19
CU013202 CAK54633    
CU013490 CAK54932    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBE2L3 NP_003338 M.musculus Ube2l3 22195 Gene Info NP_033482 100
A.gambiae AgaP_AGAP001056 1272856   XP_311779 83
D.melanogaster UbcD10 37035   NP_477414 74
C.elegans ubc-18 175985   NP_498541 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)