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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SNAP29, Synaptosomal-associated protein, 29kDa
Sequence ID:NM_004782
RefSeqGene ID:NG_012152
Entrez Gene ID:9342
Ensembl ID:ENSG00000099940

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 21213324 - 21242262

NM_004782 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13442121329121213634
3455412122462421224820
5426272123533621235421
6287262123775821237856
72742592124196621245498

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3900895Full LengthBC009715synaptosomal-associated protein, 29kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004773  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004782 NP_004773 O95721 SNAP-25
SNARE

Related Sequences

 
mRNAGenPeptSwissProt
AF115436 AAD11436 O95721
BC009715 AAH09715 O95721
BT007357 AAP36021 O95721
CR456582 CAG30468 O95721
CU013181 CAK54612  
CU013469 CAK54911  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SNAP29 NP_004773 R.norvegicus Snap29 116500   NP_446262 85
M.musculus Snap29 67474 Gene Info NP_075837 84
D.melanogaster usnp 37774   NP_523831 35
A.gambiae AgaP_AGAP011135 3291255   XP_564390 34
C.elegans K02D10.5 176233   NP_498940 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)