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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ABCB6, ATP-binding cassette, sub-family B (MDR/TAP), member 6
Sequence ID:NM_005689
RefSeqGene ID:NG_032110
Entrez Gene ID:10058
Ensembl ID:ENSG00000115657

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q36Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 220074493 - 220080881

 Exon Info From UCSC:
NM_005689

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3162881Full LengthBC000559ATP-binding cassette, sub-family B (MDR/TAP), member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005680  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005689 NP_005680 Q9NP58 ABC_tran
ABC_membrane

Related Sequences

 
mRNAGenPeptSwissProt
AF070598 AAC28653 Q9NP58
AF076775 AAF75107 Q9NP58
AF308472 AAG33617 Q9NP58
BC000559 AAH00559 Q9NP58
BC043423 AAH43423 Q9NP58
DQ891876 ABM82802  
DQ895063 ABM85989  
AK057026 BAB71347 Q9NP58
AK172812 BAD18782 Q9NP58
AK303230 BAG64317 B4E055
AJ289233 CAB95766 Q9NP58

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABCB6 NP_005680 M.musculus Abcb6 74104 Gene Info NP_076221 89
R.norvegicus Abcb6 140669   NP_542149 88
C.elegans hmt-1 176540   NP_001022812 56
A.gambiae AgaP_AGAP002278 1269280   XP_307900 53
D.melanogaster Hmt-1 41925   NP_650503 52
S.pombe hmt1 3361134   NP_588371 47
N.crassa NCU00010 3873135   XP_956997 44
P.falciparum PfMDR2 812037   XP_001348629 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)