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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ABTB1, Ankyrin repeat and BTB (POZ) domain containing 1
Sequence ID:NM_032548
NM_172027
RefSeqGene ID:NG_029479
Entrez Gene ID:80325
Ensembl ID:ENSG00000114626

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 127391800 - 127399763


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4309664Full LengthBC011858ankyrin repeat and BTB (POZ) domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115937  NP_742024  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032548 NP_115937   BTB
NM_172027 NP_742024 Q969K4 Ank
BTB

Related Sequences

 
mRNAGenPeptSwissProt
BC011858 AAH11858 Q969K4
AF297986 AAK57478 Q969K4
AF447886 AAQ04661 Q969K4
AB053324 BAB55648 Q969K4
AB053325 BAB55649 Q969K4
AB053326 BAB55650 Q969K4
AK090422 BAC03403 Q8NF57
AK130594 BAC85392 Q969K4
AK315148 BAG37596 B2RCJ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABTB1 NP_742024 R.norvegicus Abtb1 297432   NP_001005902 95
M.musculus Abtb1 80283 Gene Info NP_084527 94
S.pombe btb3 2542872   NP_593682 34
N.crassa NCU03186 3881435   XP_965286 34
A.thaliana AT2G04740 815017   NP_178551 33
S.cerevisiae YIL001W 854816   NP_012265 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)