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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SFTPC, surfactant protein C
Sequence ID:NM_001172357
NM_001172410
NM_003018
RefSeqGene ID:NG_016968
Entrez Gene ID:6440
Ensembl ID:ENSG00000168484

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PULMONARY FIBROSIS, IDIOPATHICELMOD2
MUC5B
SFTPA1
SFTPA1
SFTPA2
TERC
TERT
SURFACTANT METABOLISM DYSFUNCTION, PULMONARY, 1CSF2RB
SFTPB
SURFACTANT METABOLISM DYSFUNCTION, PULMONARY, 2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:8p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 22016233 - 22021989

 Exon Info From UCSC:
NM_001172357
NM_001172410
NM_003018

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4043169Full LengthBC005913surfactant protein C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003009  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001172357 NP_001165828    
NM_001172410 NP_001165881    
NM_003018 NP_003009 P11686 BRICHOS

Related Sequences

 
mRNAGenPeptSwissProt
J03553 AAA36631 P11686
J03517 AAA36634 P11686
BC005913 AAH05913 P11686
DQ884411 ABI63378 P11686
JF432737 ADZ15954  
AK315742 BAG38097 P11686
AK298119 BAG60401 B4DNY9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SFTPC NP_001165881 R.norvegicus Sftpc 50683   NP_059038 83
M.musculus Sftpc 20389 Gene Info NP_035489 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)