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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C1orf86, chromosome 1 open reading frame 86
Sequence ID:NR_024445
NM_001146310
NM_001256945
NM_001256946
NM_001256947
NM_182533
NR_046424
NR_046425
NR_046426
NR_046427
Entrez Gene ID:199990
Ensembl ID:ENSG00000162585

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 2120987 - 2131346

 Exon Info From UCSC:
NM_001146310
NM_182533

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40022365Full LengthBC103992chromosome 1 open reading frame 86
5310918IncompleteBC066360chromosome 1 open reading frame 86
6016314IncompleteBC078145chromosome 1 open reading frame 86

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001146310 NP_001139782    
NM_001256945 NP_001243874    
NM_001256946 NP_001243875    
NM_001256947 NP_001243876    
NM_182533 NP_872339    

Related Sequences

 
mRNAGenPeptSwissProt
BC066360 AAH66360 Q6NZ36
BC103992 AAI03993 Q6NZ36
AF469129 AAP97719 Q7Z4P6
AF461903 AAQ04817 Q6NZ36
AK055593 BAB70965 Q6NZ36
AK093927 BAC04254 Q8N9S5
AK126870 BAC86730 Q6NZ36
AK127994 BAC87220 Q6ZRT9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C1orf86 NP_872339 R.norvegicus RGD1308923 362678   NP_001102168 58
M.musculus 2610002J02Rik 67513 Gene Info NP_001177374 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)