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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BYSL, bystin-like
Sequence ID:NM_004053
Entrez Gene ID:705
Ensembl ID:ENSG00000112578

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 41888966 - 41897235

NM_004053 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16044188896441889567
6057674189511141895273
7689064189786941898007
90710404189837241898505
104112014189913341899293
120213044189946541899567
130519884190009841900781

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2989807Full LengthBC007340bystin-like
5226210Full LengthBC062627bystin-like
6011459Full LengthBC050645bystin-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004044  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004053 NP_004044 Q13895 Bystin

Related Sequences

 
mRNAGenPeptSwissProt
L36720 AAC16603 Q13895
BC007340 AAH07340 Q13895
BC050645 AAH50645 Q13895
BC062627 AAH62627 Q13895
DQ892914 ABM83840  
DQ896163 ABM87162  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BYSL NP_004044 M.musculus Bysl 53414 Gene Info NP_058555 91
A.gambiae AgaP_AGAP002923 1273040   XP_311981 58
D.melanogaster bys 31701   NP_511074 54
C.elegans byn-1 175968   NP_498510 53
A.thaliana AT1G31660 840053   NP_174447 46
S.pombe SPBC13G1.09 2539887   NP_596559 46
S.cerevisiae ENP1 852549   NP_009806 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)