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Gene Info

Gene Information For:Hs. ATP6V0D1, ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1
Sequence ID:NM_004691
RefSeqGene ID:NG_011482
Entrez Gene ID:9114
Ensembl ID:ENSG00000159720

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 67471916 - 67475635

NM_004691 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
196946747191667472591
6957726747269567472772
7739496747287367473049
95010276747317667473253
102811076747700167477080
110812866747843067478608
128714586748744667487617
145916886751485967515088

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4126712Full LengthBC008861ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004682  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004691 NP_004682 P61421 vATP-synt_AC39

Related Sequences

 
mRNAGenPeptSwissProt
L05087 AAC15852 P61421
BC008861 AAH08861 P61421
DQ893270 ABM84196  
DQ896601 ABM87600  
AK313035 BAG35868 B2R7M1
AK300570 BAH13305 B7Z6L9
AK301630 BAH13524 B7Z788
X71490 CAA50591 P61421

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP6V0D1 NP_004682 M.musculus Atp6v0d1 11972 Gene Info NP_038505 100
R.norvegicus Atp6v0d1 291969   NP_001011927 100
D.melanogaster VhaAC39 31342   NP_570080 81
A.gambiae AgaP_AGAP000721 1272314   XP_311260 80
C.elegans vha-16 172134   NP_491515 75
S.pombe vma6 2542384   NP_594237 56
N.crassa NCU03395 3872989   XP_956842 53
A.thaliana AT3G28715 822503   NP_189513 51
A.thaliana AT3G28710 822502   NP_189512 51
S.cerevisiae VMA6 851168   NP_013552 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)