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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SUPV3L1, suppressor of var1, 3-like 1 (S. cerevisiae)
Sequence ID:NM_003171
Entrez Gene ID:6832
Ensembl ID:ENSG00000156502

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone marrow, brain, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 70940047 - 70968791

 Exon Info From UCSC:
NM_003171

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5297587Full LengthBC036112suppressor of var1, 3-like 1 (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003162  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_003171 NP_003162 Q8IYB8 EC 3.6.4.13 Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF042169 AAB97370 Q8IYB8 EC 3.6.4.13
BC036112 AAH36112 Q8IYB8 EC 3.6.4.13
DQ891004 ABM81930    
DQ894183 ABM85109    
AK290416 BAF83105 Q8IYB8 EC 3.6.4.13
AK299670 BAH13097 B7Z611  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SUPV3L1 NP_003162 M.musculus Supv3l1 338359 Gene Info NP_852088 89
R.norvegicus Supv3l1 294385   NP_001012480 89
A.gambiae AgaP_AGAP003508 1270921   XP_309651 62
D.melanogaster CG9791 40543   NP_649452 61
C.elegans C08F8.2 178022   NP_001040911 49
A.thaliana ATSUV3 827134   NP_193215 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)