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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. A4GALT, alpha 1,4-galactosyltransferase
Sequence ID:NM_017436
RefSeqGene ID:NG_007495
Entrez Gene ID:53947

Database Links

UniGeneEntrez GeneOMIMHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 43088126 - 43091583

NM_017436 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3913851Full LengthBC017068alpha 1,4-galactosyltransferase
6161307Full LengthBC055286alpha 1,4-galactosyltransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059132  

Protein Infomation

NM_017436 NP_059132 Q9NPC4 EC Gly_transf_sug

Related Sequences

BC017068 AAH17068 Q9NPC4 EC
BC055286 AAH55286 Q5D079  
DQ891619 ABM82545    
DQ894811 ABM85737    
AB037883 BAA95915 Q9NPC4 EC
AK312927 BAG35771 Q9NPC4 EC
AJ245581 CAB93532 Q9NPC4 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens A4GALT NP_059132 R.norvegicus A4galt 63888   NP_071576 81
M.musculus A4galt 239559 Gene Info NP_001004150 78
A.gambiae AgaP_AGAP008258 1277725   XP_317211 35
A.gambiae AgaP_AGAP008260 3291688   XP_555205 34
A.gambiae AgaP_AGAP008259 4578099   XP_001237894 34
D.melanogaster alpha4GT1 33512   NP_608737 34
D.melanogaster alpha4GT2 43124   NP_651434 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)