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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EDA, ectodysplasin A
Sequence ID:NM_001005609
NM_001005610
NM_001005612
NM_001005613
NM_001399
NM_001005611
NM_001005614
RefSeqGene ID:NG_009809
Entrez Gene ID:1896
Ensembl ID:ENSG00000158813

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ECTODERMAL DYSPLASIA, ANHIDROTIC, X-LINKED 
TOOTHAGENESIS, SELECTIVE, X-LINKED 1 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq12-q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 68835910 - 69259311

 Exon Info From UCSC:
NM_001005609
NM_001005610
NM_001005612
NM_001005613
NM_001399
NM_001005611

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8991859Full LengthBC126143ectodysplasin A
9052569Full LengthBC144049ectodysplasin A
9052571Full LengthBC144051ectodysplasin A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001390  NP_001005609  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001005609 NP_001005609   TNF
Collagen
NM_001005610 NP_001005610    
NM_001005612 NP_001005612    
NM_001005613 NP_001005613    
NM_001399 NP_001390 Q92838 TNF
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
AF060999 AAC36302 Q92838
U59228 AAC50679 Q92838
AF040628 AAC77363 Q92838
AF061189 AAC77371 Q92838
AF061190 AAC77372 Q92838
AF061191 AAC77373 Q92838
AF061192 AAC77374 Q92838
AF061193 AAC77375 Q92838
AF061194 AAC77376 Q92838
BC126143 AAI26144 Q92838
BC144049 AAI44050 Q92838
BC144051 AAI44052 Q92838

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EDA NP_001005612 R.norvegicus Eda 302424   XP_228582 95
M.musculus Eda 13607 Gene Info NP_034229 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)