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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ST6GALNAC1, ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
Sequence ID:NM_018414
Entrez Gene ID:55808
Ensembl ID:ENSG00000070526

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 74620837 - 74625278

NM_018414 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
97717462084674621608
7728717462190074621999
8729617462208774622176
96210657462237074622473
106612047462273274622870
120513767462314874623319
137715457462349674623664
154622457462509374625792
224625507463958974639893

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4816713Full LengthBC022462ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060884  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_018414 NP_060884 Q9NSC7 EC 2.4.99.3 Glyco_transf_29

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC022462 AAH22462 Q8TBJ6  
AY096001 AAM22800 Q9NSC7 EC 2.4.99.3
AY358918 AAQ89277 Q9NSC7 EC 2.4.99.3
JF432170 ADZ15387    
AK000113 BAA90953 Q9NXQ7  
Y11339 CAA72179 Q9NSC7 EC 2.4.99.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ST6GALNAC1 NP_060884 M.musculus St6galnac1 20445 Gene Info NP_035501 72
R.norvegicus St6galnac1 287920   NP_001099329 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)