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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MSMO1, methylsterol monooxygenase 1
Sequence ID:NM_001017369
NM_006745
Entrez Gene ID:6307
Ensembl ID:ENSG00000052802

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4q32-q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 166248872 - 166263120

 Exon Info From UCSC:
NM_001017369
NM_006745

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3866053Full LengthBC010653sterol-C4-methyl oxidase-like
6498540Full LengthBC107879sterol-C4-methyl oxidase-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006736  NP_001017369  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001017369 NP_001017369     Sterol_desat
NM_006745 NP_006736 Q15800 EC 1.14.13.72 Sterol_desat

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U93162 AAB81566 Q15800 EC 1.14.13.72
U60205 AAC50587 Q15800 EC 1.14.13.72
BC010653 AAH10653 Q15800 EC 1.14.13.72
BC107879 AAI07880 Q15800 EC 1.14.13.72
DQ891060 ABM81986    
DQ894237 ABM85163    
AK292418 BAF85107 Q15800 EC 1.14.13.72
AK295432 BAH12066 A8MYF6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MSMO1 NP_006736 M.musculus Sc4mol 66234 Gene Info NP_079712 89
R.norvegicus Msmo1 140910   NP_543162 89
N.crassa NCU06402 3878388   XP_962240 42
A.thaliana SMO2-2 817488   NP_850133 41
S.pombe erg25 2543373   NP_592903 40
A.thaliana SMO2-1 837254   NP_563789 39
S.cerevisiae ERG25 852951   NP_011574 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)