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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC1A7, solute carrier family 1 (glutamate transporter), member 7
Sequence ID:NM_006671
Entrez Gene ID:6512
Ensembl ID:ENSG00000162383

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p32.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 53552855 - 53608293

 Exon Info From UCSC:
NM_006671

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4634197Full LengthBC012119solute carrier family 1 (glutamate transporter), member 7
4646259Full LengthBC017242solute carrier family 1 (glutamate transporter), member 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006662  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006671 NP_006662 O00341 SDF

Related Sequences

 
mRNAGenPeptSwissProt
U76362 AAB53971 O00341
BC000651 AAH00651 Q9BW45
BC012119 AAH12119 O00341
BC017242 AAH17242 O00341
DQ892299 ABM83225  
DQ895498 ABM86424  
JF917096 AEI69348 G1CT06
AK093921 BAG52786 B3KSM4
AB593059 BAJ84006 F1T0D2
AB593060 BAJ84007 F1T0D3
AB593061 BAJ84008 F1T0D4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC1A7 NP_006662 R.norvegicus Slc1a7 366432   NP_001102443 92
M.musculus Slc1a7 242607 Gene Info NP_666367 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)