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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PLD2, phospholipase D2
Sequence ID:NM_001243108
NM_002663
RefSeqGene ID:NG_029608
Entrez Gene ID:5338
Ensembl ID:ENSG00000129219

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 4710409 - 4726585


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3907928Full LengthBC015033phospholipase D2
5526564Full LengthBC056871phospholipase D2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002654  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001243108 NP_001230037      
NM_002663 NP_002654 O14939 EC 3.1.4.4 PH
PLDc
PX

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF038440 AAB96655 O14939 EC 3.1.4.4
AF038441 AAB96656 O14939 EC 3.1.4.4
AF035483 AAC24498 O14939 EC 3.1.4.4
AF033850 AAD04197 O14939 EC 3.1.4.4
BC015033 AAH15033 O14939 EC 3.1.4.4
BC056871 AAH56871 O14939 EC 3.1.4.4
AY178289 AAO21120 Q86YQ7  
AB209374 BAD92611 Q59FT5  
AK304246 BAH14141 B7Z905  
AM393149 CAL38027    
AM393150 CAL38028    
AM393159 CAL38037    
AM393603 CAL38479    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PLD2 NP_002654 R.norvegicus Pld2 25097   NP_150641 90
M.musculus Pld2 18806 Gene Info NP_032902 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta