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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLURP1, secreted LY6/PLAUR domain containing 1
Sequence ID:NM_020427
RefSeqGene ID:NG_011494
Entrez Gene ID:57152
Ensembl ID:ENSG00000126233

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MELEDA DISEASE 

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 143822500 - 143823826

NM_020427 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2333143822362143822693
334453143823220143823339
454537143823745143823828

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262730Full LengthBC069292secreted LY6/PLAUR domain containing 1
8144136Full LengthBC105133secreted LY6/PLAUR domain containing 1
8144138Full LengthBC105135secreted LY6/PLAUR domain containing 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020427 NP_065160 P55000 UPAR_LY6

Related Sequences

 
mRNAGenPeptSwissProt
BC069292 AAH69292 P55000
BC105133 AAI05134 P55000
BC105135 AAI05136 P55000
AY579079 AAT01436 P55000
AY579080 AAT01437 P55000

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLURP1 NP_065160 R.norvegicus Slurp1 300016   NP_001124016 71
M.musculus Slurp1 57277 Gene Info NP_065265 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)