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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. GPT, glutamic-pyruvate transaminase (alanine aminotransferase)
Sequence ID:NM_005309
RefSeqGene ID:NG_015828
Entrez Gene ID:2875
Ensembl ID:ENSG00000167701

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 145729464 - 145732559

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4179699Full LengthBC018207glutamic-pyruvate transaminase (alanine aminotransferase)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005300  

Protein Infomation

NM_005309 NP_005300 P24298 EC Aminotran_1_2

Related Sequences

BC018207 AAH18207 P24298 EC
BT006992 AAP35638 P24298 EC
DQ893764 ABM84690    
DQ890596 ABM92213    
D10355 BAA01186 P24298 EC
AK298488 BAG60697 B4DPT5  
AK303779 BAG64738 B4E1C6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens GPT NP_005300 R.norvegicus Gpt 81670   NP_112301 88
M.musculus Gpt 76282 Gene Info NP_877957 87
A.thaliana ALAAT2 843565   NP_565040 49
A.thaliana AlaAT1 838301   NP_173173 48
S.cerevisiae ALT1 850778   NP_013190 47
N.crassa NCU03973 3873734   XP_957612 46
S.pombe SPBC582.08 2540891   NP_595176 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta