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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GPT, glutamic-pyruvate transaminase (alanine aminotransferase)
Sequence ID:NM_005309
RefSeqGene ID:NG_015828
Entrez Gene ID:2875
Ensembl ID:ENSG00000167701

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 145729464 - 145732559

 Exon Info From UCSC:
NM_005309

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4179699Full LengthBC018207glutamic-pyruvate transaminase (alanine aminotransferase)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005300  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_005309 NP_005300 P24298 EC 2.6.1.2 Aminotran_1_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC018207 AAH18207 P24298 EC 2.6.1.2
BT006992 AAP35638 P24298 EC 2.6.1.2
DQ893764 ABM84690    
DQ890596 ABM92213    
D10355 BAA01186 P24298 EC 2.6.1.2
AK298488 BAG60697 B4DPT5  
AK303779 BAG64738 B4E1C6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPT NP_005300 R.norvegicus Gpt 81670   NP_112301 88
M.musculus Gpt 76282 Gene Info NP_877957 87
A.thaliana ALAAT2 843565   NP_565040 49
A.thaliana AlaAT1 838301   NP_173173 48
S.cerevisiae ALT1 850778   NP_013190 47
N.crassa NCU03973 3873734   XP_957612 46
S.pombe SPBC582.08 2540891   NP_595176 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta