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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. SPATA20, spermatogenesis associated 20
Sequence ID:NM_001258372
Entrez Gene ID:64847
Ensembl ID:ENSG00000006282

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 48631687 - 48633213

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5019010Full LengthBC025255spermatogenesis associated 20
5245538Full LengthBC111029spermatogenesis associated 20
6149633Full LengthBC065526spermatogenesis associated 20
3906576IncompleteBC017468spermatogenesis associated 20

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_073738  

Protein Infomation

NM_001258372 NP_001245301 Q8TB22  
NM_001258373 NP_001245302    
NM_022827 NP_073738 Q8TB22 DUF255

Related Sequences

BC017468 AAH17468 Q8TB22
BC025255 AAH25255 Q8TB22
BC065526 AAH65526 Q8TB22
BC111029 AAI11030 Q8TB22
DQ238597 ABB54669 Q8TB22
AK025000 BAB15051 Q8TB22
AK025622 BAB15192 Q9H6R1
AK291805 BAF84494 A8K6Z0
AK092731 BAG52603 B3KS41
AK125807 BAG54251 B3KWT9
AK302850 BAG64037 B4DZC5
AL137367 CAH56380 Q659D4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens SPATA20 NP_073738 M.musculus Spata20 217116 Gene Info NP_659076 88
R.norvegicus Spata20 360604   NP_955434 88
A.thaliana AT4G03200 828041   NP_192229 45
D.melanogaster CG8613 36593   NP_610953 44
A.gambiae AgaP_AGAP008252 1277730   XP_317217 43
C.elegans B0495.5 174243   NP_495615 41
N.crassa NCU09980 3874110   XP_957963 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)