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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. PPARA, peroxisome proliferator-activated receptor alpha
Sequence ID:NM_001001928
RefSeqGene ID:NG_012204
Entrez Gene ID:5465
Ensembl ID:ENSG00000186951

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 46635711 - 46637812

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3867243IncompleteBC009069peroxisome proliferative activated receptor, alpha
6259713IncompleteBC071932peroxisome proliferator-activated receptor alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001928  NP_005027  

Protein Infomation

NM_001001928 NP_001001928 Q07869 Hormone_recep
NM_005036 NP_005027 Q07869 Hormone_recep
NM_207327 NP_997210 Q6NVV7  

Related Sequences

L02932 AAA36468 Q07869
S74349 AAB32649 Q07869
BC045796 AAH45796 Q6NVV7
BC067871 AAH67871 Q6NVV7
AY258326 AAO89521 Q86SF0
AY258327 AAO89522 Q86SF0
AY258328 AAO89523 Q86SF0
AY258329 AAO89524 Q86SF0
AY258330 AAO89525 Q86SF0
AY258331 AAO89526 Q86SF0
EU395809 ABY73535 B0G0X3
EU650667 ACD12656 Q07869
HQ692862 ADZ17373 F1D8S4
AK289821 BAF82510 Q07869
AK311946 BAG34887 B2R4U0
AB307690 BAH02281 Q07869
Y07619 CAA68898 Q07869
Y16186 CAA76112 O75780
CR456415 CAG30301 Q6ICF3
CR456547 CAG30433 Q07869
CR457435 CAG33716 Q07869
CU013147 CAK54578  
CU013435 CAK54877  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens PPARA NP_001001928 R.norvegicus Ppara 25747   NP_037328 92
M.musculus Ppara 19013 Gene Info NP_001106889 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta