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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RIN1, Ras and Rab interactor 1
Sequence ID:NM_004292
Entrez Gene ID:9610
Ensembl ID:ENSG00000174791

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 66097712 - 66103479

NM_004292 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
156966609954166100222
6978486610072866100879
8499806610099766101128
98112866610138966101694
128720246610198466102721
202521166610287766102968
211721896610308066103152
219023046610323266103346
230524856610344866103628
248626986610378766103999

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4549333Full LengthBC014417Ras and Rab interactor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004283  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004292 NP_004283 Q13671 RA
VPS9

Related Sequences

 
mRNAGenPeptSwissProt
L36463 AAB67270 Q13671
BC014417 AAH14417 Q13671
DQ893675 ABM84601  
DQ895838 ABM86764  
AB209445 BAD92682 Q59FL5
AK297757 BAG60106 B4DN44
AK301430 BAG62958 B4DW96
AK295365 BAH12046 B7Z310

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RIN1 NP_004283 R.norvegicus Rin1 207119   NP_620607 81
M.musculus Rin1 225870 Gene Info NP_663470 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)