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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CUL4B, cullin 4B
Sequence ID:NM_001079872
NM_003588
RefSeqGene ID:NG_009388
Entrez Gene ID:8450
Ensembl ID:ENSG00000158290

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
MENTAL RETARDATION, X-LINKED, SYNDROMIC 15 (CABEZAS TYPE) 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 119658473 - 119694151

 Exon Info From UCSC:
NM_001079872
NM_003588

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5269392Full LengthBC036216cullin 4B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003579  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001079872 NP_001073341    
NM_003588 NP_003579 Q13620 Cullin

Related Sequences

 
mRNAGenPeptSwissProt
U58091 AAC50548 Q13620
BC036216 AAH36216 Q13620
AF212995 AAK16812 Q13620
AY365125 AAR13073 Q13620
DQ894750 ABM85676  
AB014595 BAA31670 Q13620
AK315037 BAG37520 Q13620
AK123688 BAG53936 Q13620
AK299081 BAH12944 Q13620
BX537787 CAD97843 Q13620

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CUL4B NP_003579 R.norvegicus Cul4b 302502   NP_001100421 99
M.musculus Cul4b 72584 Gene Info NP_001103612 98
A.gambiae AgaP_AGAP007727 1269506   XP_308149 67
D.melanogaster Cul-4 35780   NP_610352 64
A.thaliana CUL4 834663   NP_568658 56
N.crassa NCU00272 3873913   XP_957743 36
S.pombe pcu4 2543116   NP_594195 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)