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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MCTS1, malignant T cell amplified sequence 1
Sequence ID:NM_001137554
NM_014060
Entrez Gene ID:28985
Ensembl ID:ENSG00000232119

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 119737834 - 119746240

 Exon Info From UCSC:
NM_001137554
NM_014060

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3344210Full LengthBC001013malignant T cell amplified sequence 1
30557789Full LengthBC095461malignant T cell amplified sequence 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054779  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001137554 NP_001131026    
NM_014060 NP_054779 Q9ULC4 PUA

Related Sequences

 
mRNAGenPeptSwissProt
BC001013 AAH01013 Q9ULC4
BC095461 AAH95461 Q9ULC4
AF456465 AAM50513 Q8NHH5
AY364258 AAQ76817 Q9ULC4
HQ448721 ADQ33199  
AB034206 BAA86055 Q9ULC4
AK311993 BAG34931 Q9ULC4
AK294834 BAG57943 Q9ULC4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MCTS1 NP_054779 M.musculus Mcts1 68995 Gene Info NP_081178 99
R.norvegicus Mcts1 302500   NP_001037702 99
C.elegans C11D2.7 177377   NP_741412 64
A.gambiae AgaP_AGAP003344 1275021   XP_314243 63
D.melanogaster CG5941 31536   NP_572288 60
A.thaliana AT1G09150 837434   NP_172387 55
P.falciparum PFE1470w 813108   XP_001351849 50
S.cerevisiae TMA20 856725   NP_010923 49
S.pombe SPBC31F10.12 2540396   NP_596574 43
N.crassa NCU08678 3878175   XP_962027 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)