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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC13A2, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
Sequence ID:NM_001145976
NM_001145975
NM_003984
NR_027384
Entrez Gene ID:9058
Ensembl ID:ENSG00000007216

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 26800755 - 26824796

 Exon Info From UCSC:
NM_001145976
NM_001145975
NM_003984

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40006564Full LengthBC096276solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
40006565Full LengthBC096277solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
40006566Full LengthBC096278solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
40006572Full LengthBC096279solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003975  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145975 NP_001139447    
NM_003984 NP_003975 Q13183 Na_sulph_symp

Related Sequences

 
mRNAGenPeptSwissProt
U26209 AAA98504 Q13183
BC096276 AAH96276 Q4VAR9
BC096277 AAH96277 Q13183
BC096278 AAH96278 Q13183
BC096279 AAH96279 Q13183
AK314684 BAG37236 Q13183
AK091926 BAG52442 B3KRN0
AK298388 BAG60623 B4DPL1
AK303909 BAG64838 B4E1M6
AK303936 BAG64864 B4E1Q2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC13A2 NP_003975 M.musculus Slc13a2 20500 Gene Info NP_071856 78
R.norvegicus Slc13a2 65202   NP_113934 77
A.gambiae AgaP_AGAP007054 3290294   XP_565152 42
A.gambiae AgaP_AGAP007055 1270048   XP_308709 41
A.thaliana TDT 834806   NP_199567 41
D.melanogaster Indy 40049   NP_730363 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)