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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LOX, lysyl oxidase
Sequence ID:NM_001178102
NM_002317
RefSeqGene ID:NG_008722
Entrez Gene ID:4015
Ensembl ID:ENSG00000113083

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IAEFEMP2
FBLN5

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 121402018 - 121413929

 Exon Info From UCSC:
NM_001178102
NM_002317

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30561279Full LengthBC089436lysyl oxidase
30915233Full LengthBC074872lysyl oxidase
30915536Full LengthBC074820lysyl oxidase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002308  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001178102 NP_001171573      
NM_002317 NP_002308 P28300 EC 1.4.3.13 Lysyl_oxidase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M94054 AAA59525 P28300 EC 1.4.3.13
S78694 AAB21243 P28300 EC 1.4.3.13
S45875 AAB23549 P28300 EC 1.4.3.13
AF039291 AAD02130 P28300 EC 1.4.3.13
BC074820 AAH74820 P28300 EC 1.4.3.13
BC074872 AAH74872 P28300 EC 1.4.3.13
BC089436 AAH89436 P28300 EC 1.4.3.13
AK315873 BAF98764 B0AZT2  
AK312269 BAG35200 P28300 EC 1.4.3.13
AK297709 BAG60066 B4DN04  
AK298781 BAG60920 B4DQF8  
AK316309 BAH14680 B7ZAJ4  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LOX NP_002308 M.musculus Lox 16948 Gene Info NP_034858 88
R.norvegicus Lox 24914   NP_058757 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)