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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AMT, aminomethyltransferase
Sequence ID:NM_000481
NM_001164710
NM_001164711
NM_001164712
NR_028435
RefSeqGene ID:NG_015986
Entrez Gene ID:275
Ensembl ID:ENSG00000145020

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
GLYCINE ENCEPHALOPATHYGCSH
GLDC

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.2-p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 49454211 - 49459900

 Exon Info From UCSC:
NM_000481
NM_001164710
NM_001164711
NM_001164712

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4821331Full LengthBC044792aminomethyltransferase
2959737IncompleteBC007546aminomethyltransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000472  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000481 NP_000472 P48728 EC 2.1.2.10 GCV_T
GCV_T_C
NM_001164710 NP_001158182      
NM_001164711 NP_001158183      
NM_001164712 NP_001158184      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC007546 AAH07546 Q96IG6  
BC044792 AAH44792 Q49A62  
D13811 BAA02967 P48728 EC 2.1.2.10
AK290600 BAF83289 P48728 EC 2.1.2.10
AK091738 BAG52409 B3KRJ7  
AK096062 BAG53206 B3KTU4  
AK293481 BAG56972 P48728 EC 2.1.2.10
AK293594 BAG57060 B4DEE9  
AK294592 BAG57780 B4DGG9  
AK296177 BAG58912 P48728 EC 2.1.2.10
AK301072 BAG62678 B4DVG6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AMT NP_000472 M.musculus Amt 434437 Gene Info NP_001013836 89
R.norvegicus Amt 306586   NP_001014026 89
C.elegans aminomethytransferase 178960   NP_504502 55
A.gambiae AgaP_AGAP001124 1282039   XP_322034 54
D.melanogaster CG6415 34474   NP_609441 54
A.thaliana AT1G11860 837733   NP_172650 51
S.pombe gcv1 2543195   NP_594015 48
N.crassa NCU02727 3881252   XP_965112 47
S.cerevisiae GCV1 851582   NP_010302 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)