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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ASNSD1, asparagine synthetase domain containing 1
Sequence ID:NM_019048
Entrez Gene ID:54529
Ensembl ID:ENSG00000138381

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p24.3-q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 190530975 - 190535557

NM_019048 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1212190526124190526335
213266190528626190528679
267342190530101190530176
3431898190530766190532321
18992080190532489190532670
20812470190535166190535555

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3453136Full LengthBC001243asparagine synthetase domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061921  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019048 NP_061921 Q9NWL6 Asn_synthase

Related Sequences

 
mRNAGenPeptSwissProt
BC001243 AAH01243 Q9NWL6
AY116969 AAM77212 Q9NWL6
AK000759 BAA91364 Q9NWL6
AB075481 BAE45745 Q9NWL6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ASNSD1 NP_061921 M.musculus Asnsd1 70396 Gene Info NP_598489 77
R.norvegicus Asnsd1 299507   NP_001100233 75
A.thaliana AT2G03667 5007865   NP_001077875 42
C.elegans M18.3 178154   NP_502296 41
A.gambiae AgaP_AGAP010492 4577820   XP_001237560 38
D.melanogaster CG17486 3355138   NP_001036446 38
N.crassa NCU07300 3878303   XP_962154 38
S.pombe SPBC4F6.11c 2540867   NP_596111 37
S.cerevisiae YML096W 854877   NP_013613 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)