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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PEX16, Peroxisomal biogenesis factor 16
Sequence ID:NM_004813
NM_057174
RefSeqGene ID:NG_008460
Entrez Gene ID:9409
Ensembl ID:ENSG00000121680

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 45931724 - 45939388

 Exon Info From UCSC:
NM_004813
NM_057174

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822311Full LengthBC004356peroxisomal biogenesis factor 16
2822827Full LengthBC000467peroxisomal biogenesis factor 16

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004804  NP_476515  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004813 NP_004804 Q9Y5Y5 Pex16
NM_057174 NP_476515   Pex16

Related Sequences

 
mRNAGenPeptSwissProt
AF118240 AAD22466 Q9Y5Y5
BC000467 AAH00467 Q9Y5Y5
BC004356 AAH04356 Q9Y5Y5
HQ447875 ADQ32359  
AB016531 BAA88826 Q9Y5Y5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PEX16 NP_004804 M.musculus Pex16 18633 Gene Info NP_660104 91
R.norvegicus Pex16 311203   NP_001012088 87
A.gambiae AgaP_AGAP002283 1269276   XP_307896 42
D.melanogaster pex16 40293   NP_649252 39
N.crassa NCU01850 3880033   XP_963884 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)