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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KCNN4, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
Sequence ID:NM_002250
Entrez Gene ID:3783
Ensembl ID:ENSG00000104783

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 44271694 - 44285013

NM_002250 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
35574427068644271240
5587254427169144271858
7267954427311444273183
7969144427359344273711
91510254427387044273980
102611614427615144276286
116215894427834344278770
159016854428069244280787
168622404428485444285408

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4431534Full LengthBC015337potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002241  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002250 NP_002241 O15554 CaMBD
SK_channel
Ion_trans_2

Related Sequences

 
mRNAGenPeptSwissProt
AF000972 AAB82739 O15554
AF022150 AAC23541 O15554
AF053403 AAC35281 O15554
AF033021 AAC36804 O15554
AF022797 AAC51913 O15554
BC015337 AAH15337 O15554
AF395661 AAK81862 O15554
BT007426 AAP36094 O15554
DQ891493 ABM82419  
DQ894684 ABM85610  
AB128983 BAI52725 D1MQ08
AB128984 BAI52726 D1MQ09
AB128985 BAI52727 D1MQ10

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KCNN4 NP_002241 M.musculus Kcnn4 16534 Gene Info NP_001156982 88
R.norvegicus Kcnn4 65206   NP_075410 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)