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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BRPF1, bromodomain and PHD finger containing, 1
Sequence ID:NM_001003694
NM_004634
Entrez Gene ID:7862
Ensembl ID:ENSG00000156983

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p26-p25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 9773412 - 9789557

 Exon Info From UCSC:
NM_001003694
NM_004634

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6140996Full LengthBC053851bromodomain and PHD finger containing, 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001003694  NP_004625  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001003694 NP_001003694   Bromodomain
PHD
NM_004634 NP_004625 P55201 Bromodomain
PHD

Related Sequences

 
mRNAGenPeptSwissProt
M91585 AAB02119 P55201
BC053851 AAH53851 P55201
AK293865 BAG57257 P55201
AL713696 CAD28495 P55201

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BRPF1 NP_001003694 M.musculus Brpf1 78783 Gene Info NP_084454 98
R.norvegicus Brpf1 679713   XP_002729468 98
A.gambiae AgaP_AGAP007617 4576217   XP_564621 49
D.melanogaster Br140 35648   NP_610266 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)