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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GJC2, gap junction protein, gamma 2, 47kDa
Sequence ID:NM_020435
RefSeqGene ID:NG_011838
Entrez Gene ID:57165
Ensembl ID:ENSG00000198835

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q42.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 228337660 - 228346354

NM_020435 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1156228337552228337707
1572241228345440228347524

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30558819Full LengthBC089439gap junction protein, gamma 2, 47kDa
5734498IncompleteBC035840gap junction protein, gamma 2, 47kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065168  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020435 NP_065168 Q5T442 Connexin

Related Sequences

 
mRNAGenPeptSwissProt
BC035840 AAH35840 Q5T442
BC089439 AAH89439 Q5T442
AY285161 AAP37488 Q5T442

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GJC2 NP_065168 R.norvegicus Gjc2 497913   XP_002727761 86
M.musculus Gjc2 118454 Gene Info NP_536702 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)